Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929557.1_cds_XP_016476826.1_68619
CDS Infomation

[gene=LOC107798365] [db_xref=GeneID:107798365] [protein=probable protein phosphatase 2C 33] [protein_id=XP_016476826.1] [location=complement(join(103192..103683,103771..103994,105458..105575,105665..106048,107620..107865))] [gbkey=CDS]
Sequence

ATGGGTTCCTGCTTATCATCTGAAAGCAGGAGCCCTCATCCCGGTTCTCCTGCATCTTCA
AGTAGGAAAAGGAAGAGCTCAAAAAAGAGGTTAGGTTCACGAAATTCTTCCTTCGACTAT
CATAAGGAAGAACTGCTGCATAGGATACCGGGGCGTATGTTCTTGAATGGTTCTAGTGAG
GTGGCTTCACTCTTCAGTCAGCAGGGCAACAAAGGCACTAATCAAGATGCTATGATTGTT
TGGGAGAATTTTGGTTCCAGAACAGATACTGTTTTCTGTGGTGTTTTTGACGGCCATGGT
CCTTACGGTCATATGGTTGCAAAACTAGTCAGAGATGCTCTTCCTTTAAAGCTAAGCACA
CACTGGGAAGTTAATATAAAAAGTGAGGATGTTCTAAGAGAGATCAGTCTCAACAGGGGG
AGTAGCCTATATCCTGAGGATGCTTCCCTTATCTCTGAGGAGTCGAGAGTTTCAATTGAT
GTTGAAGATACTGAAAAGCACACAGAGGTGTTTCAAACGTTGAAGGGGTCATTTCTGAAG
GCTTATAAGGTTGTGGATAGAGAGTTGAGAAGCTATACCAATATCGATTGCCTCTGTAGT
GGAACAACAGCAGTAACCCTAGTTAAACAGGGTAAGGATCTTGTTATTGGAAATATTGGG
GATTCTAGAGCTGTGCTGTGTATGAGAGGCGACGATGATTCTCTCACTGCAGTGCAATTG
ACAGTAGATCTTAAGCCCAATTTACCAGCGGAGGCTGAGAGGATTCGCAAATGTAAAGGG
CGAGTGTTTTCTCTTCATGATGAGCCGGACGTTGCAAGAGTGTGGATGCCAAACAGCGAT
TCTCCTGGACTTGCCATGGCCCGTGCTTTTGGAGATTTTTGCCTCAAGGATTTTGGTGTC
ATCTCAGTGCCTGAAATTTCTTATAGGTGTTTATCTGAGAAAGATGAATTCATTGTTCTG
GCGACAGATGGGATTTGGGATGTGCTTTCAAATGATGAAGTAGTGAGGATTGTGGCTTCG
GCTTCATCCCGTTCATTGGCAGCTCGATCACTTGTTGAAGTAGCTGTTCGAGCTTGGAAA
ACTACATATCCAACTTCTAAAGTCGATGACTGTGCAGTTGTCTGCCTCTTCCTAGATTCA
AACTCAAATAATTTCTCTACTGCTTCCATTACAAAAGAGAATGACAAGACTGTAAGGGGA
ATGAGCGAAGGTAGCAACGAGATGGATGTTGCATCTAGTCTACCTGCATTGAATTGCGTT
GGCACTGTTCGAGAAGGTGAAGAAGTTTCAGCAGGCAGCAAAGAGGAAGCCTCAGAACAG
GAAGAGTTGCTACCGAAGACGGGGAAAGAATGGTCTGCGCTCGAAGGGGTATCTCGGGTG
AACACAGTGATGACATTACCAAGGTTTGTGCCAGACAAAGAAGAGAAGAAAGCTTCTGGA
GGATCAAAGTCAAAGAAGAAATAG

Peptide Sequence

PEP ID

XP_016476826.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 33 [Nicotiana tabacum]
Sequence

MGSCLSSESRSPHPGSPASSSRKRKSSKKRLGSRNSSFDYHKEELLHRIPGRMFLNGSSE
VASLFSQQGNKGTNQDAMIVWENFGSRTDTVFCGVFDGHGPYGHMVAKLVRDALPLKLST
HWEVNIKSEDVLREISLNRGSSLYPEDASLISEESRVSIDVEDTEKHTEVFQTLKGSFLK
AYKVVDRELRSYTNIDCLCSGTTAVTLVKQGKDLVIGNIGDSRAVLCMRGDDDSLTAVQL
TVDLKPNLPAEAERIRKCKGRVFSLHDEPDVARVWMPNSDSPGLAMARAFGDFCLKDFGV
ISVPEISYRCLSEKDEFIVLATDGIWDVLSNDEVVRIVASASSRSLAARSLVEVAVRAWK
TTYPTSKVDDCAVVCLFLDSNSNNFSTASITKENDKTVRGMSEGSNEMDVASSLPALNCV
GTVREGEEVSAGSKEEASEQEELLPKTGKEWSALEGVSRVNTVMTLPRFVPDKEEKKASG
GSKSKKK

Transcript Sequence

Gene sequence data has not been registered.